Tag: Normalization
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How to Analyze RNAseq Data for Absolute Beginners Part 19: Understanding RNA-Seq Gene Expression Normalization
Video Tutorial Introduction: Why Normalization Matters in RNA-Seq Analysis RNA sequencing (RNA-seq) has revolutionized our ability to measure gene expression, but the raw data needs careful processing to yield meaningful biological insights. In this comprehensive guide, we’ll explore why normalization is crucial and how to convert between different expression metrics using R. Building on our…
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How to Analyze RNAseq Data for Absolute Beginners Part 3: From Count Table to DEGs – Best Practices
Video Tutorial As we move forward in our RNAseq analysis journey, we’ll be transitioning from the Linux environment to R, a powerful and versatile statistical analysis tool. R is not only a programming language but also a platform widely used in data science, statistical computing, and predictive modeling. Tech giants like Microsoft, Meta, Google, Amazon,…
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Recent Posts
- How To Analyze ATAC-seq Data For Absolute Beginners Part 3: Footprinting Analysis
- How To Analyze ATAC-seq Data For Absolute Beginners Part 2: Differential Binding Analysis Using DiffBind
- How To Analyze ATAC-seq Data For Absolute Beginners Part 1: From FASTQ To Peaks
- How To Analyze ChIP-seq Data For Absolute Beginners Part 5: Mastering Reproducibility With IDR Analysis
Tags
Adapter Trimming Alternative Splicing Analysis ATAC-seq BAM ChIP-seq chromatin accessibility Conda Environment Setting Count DESeq2 Differential Expression edgeR FASTQ gene expression Gene Expression Quantification HOMER HPC Isoform limma MACS2 miRNA miRNA-seq Normalization PCA peak calling R Reads Mapping RNAseq analysis RNAseq analysis for beginners RStudio Transcript