Tag: NCBI GEO
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How to Analyze RNAseq Data for Absolute Beginners Part 12: A Step-By-Step Guide for Submitting Your NGS Data to NCBI GEO
Video Tutorial In the world of genomics research, sharing your sequencing data isn’t just a box to check for publication – it’s a fundamental part of advancing scientific knowledge. As researchers, we spend countless hours generating and analyzing Next-Generation Sequencing (NGS) data, and making this data accessible to the broader scientific community ensures our work…
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- bulk RNA-seq (20)
- chromatin accessibility (10)
- Database (2)
- Epigenetics (10)
- HPC (3)
- Metagenomics (1)
- Scientific Programming (3)
- Transcriptomics (21)
Recent Posts
- Build Once, Run Anywhere: Creating Portable NGS Analysis Environments with Docker
- The Complete Guide to NGS Data Types and Formats: From Raw Reads to Analysis-Ready Files
- How To Analyze CUT&RUN/Tag Data For Absolute Beginners: From FASTQ to Peaks
- How To Analyze ATAC-seq Data For Absolute Beginners Part 4: ATAC-seq and RNA-seq Integration
Tags
Adapter Trimming Alternative Splicing Analysis ATAC-seq BAM ChIP-seq chromatin accessibility Conda Environment Setting Count DESeq2 Differential Expression edgeR FASTQ gene expression Gene Expression Quantification HOMER HPC Isoform limma MACS2 miRNA miRNA-seq Normalization PCA peak calling R Reads Mapping RNAseq analysis RNAseq analysis for beginners RStudio Transcript