Tag: cancer subtypes
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How to Analyze RNAseq Data for Absolute Beginners Part 6: A Comprehensive Guide for Cancer Subtype Prediction
Meta Description: Learn how to predict cancer subtypes using RNA-seq data through practical implementations of PAM50, genefu, and GSVA methods. Perfect for bioinformaticians and computational biologists working with gene expression data. Video Tutorial Introduction Cancer subtype prediction from RNA-seq data is crucial for personalized medicine and treatment optimization. This tutorial, part 6 in our RNA-seq…
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Alternative Splicing Analysis Cancer ChIP-seq Counts covariates adjustment DESeq2 Differential Expression edgeR FPKM Fusion Gene Detection gene expression GREAT HOMER HPC Isoform limma microRNA miRNA miRNA-seq Normalization protein-DNA interactions Quantification Salmon smRNA-seq TPM Transcript UMI Virus Virus-Host Virus Gene Expression