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Recent Posts

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  Build Once, Run Anywhere: Creating Portable NGS Analysis Environments with DockerJune 7, 2025
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  The Complete Guide to NGS Data Types and Formats: From Raw Reads to Analysis-Ready FilesMay 31, 2025
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  How To Analyze CUT&RUN/Tag Data For Absolute Beginners: From FASTQ to PeaksMay 24, 2025
• 
  How To Analyze ATAC-seq Data For Absolute Beginners Part 4: ATAC-seq and RNA-seq IntegrationMay 17, 2025

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Adapter Trimming Alternative Splicing Analysis ATAC-seq BAM ChIP-seq chromatin accessibility Conda Environment Setting Count DESeq2 Differential Expression edgeR FASTQ gene expression Gene Expression Quantification HOMER HPC Isoform limma MACS2 miRNA miRNA-seq Normalization PCA peak calling R Reads Mapping RNAseq analysis RNAseq analysis for beginners RStudio Transcript