-
How to Analyze RNAseq Data for Absolute Beginners Part 2: From Fastq to Counts – Best Practices
Video Tutorial Introduction The most straightforward way to obtain a count table is to request it directly from your sequencing company or your institution’s sequencing core. This option may involve an additional fee. However, for those eager to learn or save money, let’s walk through the process together. Before we dive in, a quick reminder:…
//
-
How to analyze RNAseq Data for Absolute Beginners Part 1: Environment setup
Video Tutorial Introduction RNA sequencing (RNAseq) has revolutionized the field of transcriptomics, offering unprecedented insights into gene expression patterns across entire genomes. This powerful technique allows researchers to quantify RNA levels, discover novel transcripts, and identify differentially expressed genes under various conditions. Whether you’re studying cancer progression, developmental biology, or environmental responses in organisms, RNAseq…
//
Search
Subscribe
Never miss the latest tutorials from NGS Learning Hub
Recent Posts
- How to Analyze RNAseq Data for Absolute Beginners 21: A Comprehensive Guide to Batch Effects & Covariates Adjustment
- How to Analyze RNAseq Data for Absolute Beginners Part 20: Comparing limma, DESeq2, and edgeR in Differential Expression Analysis
- How to Analyze RNAseq Data for Absolute Beginners Part 19: Understanding RNA-Seq Gene Expression Normalization
- How to Analyze RNAseq Data for Absolute Beginners Part 18: Analyzing Viral Gene Expression in Host RNA-seq Data
Tags
Alternative Splicing Analysis breast cancer classification Cancer circRNA-seq circular RNA DESeq2 Differential Expression edgeR Fusion Gene Detection gene expression immune cell profiling Isoform limma microRNA miRNA miRNA-seq NCBI GEO Normalization Quantification RNA Editing Salmon small RNA smRNA smRNA-seq TPM Transcript UMI Virus Virus-Host Virus Gene Expression